EnhancerDB
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  3. rs577162689[chr1:172938711]
Enhancers that have rs577162689[chr1:172938711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs577162689[chr1:172938711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172938123 172939437 TEF1 GTRD no Bone (Osteoblast) 21350791
chr1 172938123 172939437 TEF1 GTRD no Bone (Osteoblast) 107846511
chr1 172938586 172939119 ZNF274 GTRD no Cervix (HeLa-S3) 21350792
chr1 172938586 172939119 ZNF274 GTRD no Cervix (HeLa-S3) 107846512
chr1 172938594 172939083 ZNF274 GTRD no Bone Marrow (K562) 107846513
chr1 172938604 172939069 ZBTB33 GTRD no Lung (A549) 107846514
chr1 172938652 172939092 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350793
chr1 172938652 172939092 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846515
chr1 172938661 172939211 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846516
chr1 172938670 172939082 ZNF274 GTRD no Bone Marrow (K562) 107846517
chr1 172938687 172939058 ZNF274 GTRD no Liver (HepG2) 21350794
chr1 172938687 172939058 ZNF274 GTRD no Liver (HepG2) 107846518
chr1 172938710 172938725 FOXP1 JASPAR yes 33173186
chr1 172938711 172938726 FOXP1 JASPAR yes 33173187
Genes associated with rs577162689[chr1:172938711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More