EnhancerDB
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  3. rs577209100[chr1:220535537]
Enhancers that have rs577209100[chr1:220535537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs577209100[chr1:220535537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220535536 220535546 EN2 JASPAR yes 35488113
chr1 220535536 220535546 GBX1 JASPAR yes 35488114
chr1 220535536 220535546 GBX2 JASPAR yes 35488115
chr1 220535536 220535546 HESX1 JASPAR yes 35488116
chr1 220535536 220535546 HOXB3 JASPAR yes 35488117
chr1 220535536 220535546 LBX2 JASPAR yes 35488118
chr1 220535536 220535546 RAX JASPAR yes 35488119
chr1 220535537 220535545 BARX1 JASPAR yes 35488120
chr1 220535537 220535545 EN1 JASPAR yes 35488121
chr1 220535537 220535545 ISL2 JASPAR yes 35488122
chr1 220535537 220535545 MSX1 JASPAR yes 35488123
chr1 220535537 220535545 MSX2 JASPAR yes 35488124
chr1 220535537 220535545 PDX1 JASPAR yes 35488125
chr1 220535537 220535546 VENTX JASPAR yes 35488126
Genes associated with rs577209100[chr1:220535537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More