EnhancerDB
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  3. rs5772962[chr1:21982917]
Enhancers that have rs5772962[chr1:21982917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21978085 21988074 enh74161
Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Muscle (A673) Colon (HCT116) Lung (PC-9) Stomach
Transcript factors that have rs5772962[chr1:21982917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21982905 21982920 MEF2C JASPAR yes 27317717
chr1 21982906 21982921 MEF2A JASPAR yes 27317718
chr1 21982908 21982923 FOXP1 JASPAR yes 27317719
chr1 21982909 21982924 FOXP1 JASPAR yes 27317721
chr1 21982909 21982930 IRF1 JASPAR yes 27317722
chr1 21982910 21982925 FOXP1 JASPAR yes 27317723
chr1 21982910 21982931 IRF1 JASPAR yes 27317724
chr1 21982911 21982926 FOXP1 JASPAR yes 27317725
chr1 21982911 21982932 IRF1 JASPAR yes 27317726
chr1 21982912 21982927 FOXP1 JASPAR yes 27317727
chr1 21982912 21982933 IRF1 JASPAR yes 27317728
chr1 21982913 21982928 FOXP1 JASPAR yes 27317729
chr1 21982913 21982934 IRF1 JASPAR yes 27317730
chr1 21982914 21982929 FOXP1 JASPAR yes 27317731
chr1 21982914 21982935 IRF1 JASPAR yes 27317732
chr1 21982915 21982930 FOXP1 JASPAR yes 27317733
chr1 21982915 21982936 IRF1 JASPAR yes 27317734
chr1 21982916 21982931 FOXP1 JASPAR yes 27317735
chr1 21982916 21982937 IRF1 JASPAR yes 27317736
chr1 21982917 21982932 FOXP1 JASPAR yes 27317737
chr1 21982917 21982938 IRF1 JASPAR yes 27317738
Genes associated with rs5772962[chr1:21982917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More