EnhancerDB
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  3. rs5773896[chr1:46336752]
Enhancers that have rs5773896[chr1:46336752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46325665 46343935 enh326
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs5773896[chr1:46336752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46336749 46336764 FOXP1 JASPAR yes 28623962
chr1 46336750 46336765 FOXP1 JASPAR yes 28623963
chr1 46336751 46336757 TBP TRANSFAC yes 28623964
chr1 46336751 46336766 FOXP1 JASPAR yes 28623965
chr1 46336752 46336767 FOXP1 JASPAR yes 28623966
Genes associated with rs5773896[chr1:46336752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More