EnhancerDB
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  3. rs577424054[chr1:117014270]
Enhancers that have rs577424054[chr1:117014270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577424054[chr1:117014270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117012757 117014357 ZNF143 GTRD no Epithelial (MCF-7) 21332753
chr1 117012883 117014669 ZNF143 GTRD no Epithelial (MCF-7) 21332755
chr1 117012921 117014282 ZNF143 GTRD no Epithelial (MCF-7) 21332758
chr1 117013043 117014600 ZNF143 GTRD no Epithelial (MCF-7) 21332762
chr1 117013110 117014607 ZNF143 GTRD no Epithelial (MCF-7) 21332767
chr1 117013117 117014380 ZNF143 GTRD no Epithelial (MCF-7) 21332769
chr1 117013665 117014309 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332788
chr1 117013885 117014321 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332790
chr1 117013982 117014278 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332796
chr1 117014129 117014641 ZNF274 GTRD no Bone Marrow (K562) 21332800
chr1 117014134 117014602 ZNF274 GTRD no Bone Marrow (K562) 21332801
chr1 117014251 117014272 ZNF263 JASPAR yes 31810323
chr1 117014252 117014273 ZNF263 JASPAR yes 31810324
Genes associated with rs577424054[chr1:117014270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More