EnhancerDB
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  3. rs577465936[chr1:110496597]
Enhancers that have rs577465936[chr1:110496597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110494965 110506335 enh12130
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs577465936[chr1:110496597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110495351 110497203 ZNF143 GTRD no Epithelial (MCF-7) 21328595
chr1 110495525 110496994 ZNF274 GTRD no Cervix (HeLa-S3) 21328596
chr1 110495581 110496853 ZNF143 GTRD no Epithelial (MCF-7) 21328597
chr1 110495622 110496767 ZNF143 GTRD no Epithelial (MCF-7) 21328598
chr1 110495748 110496719 ZNF143 GTRD no Epithelial (MCF-7) 21328599
chr1 110495795 110496625 ZNF274 GTRD no Liver (HepG2) 21328602
chr1 110495872 110496772 ZNF143 GTRD no Epithelial (MCF-7) 21328608
chr1 110495913 110496718 ZNF274 GTRD no Cervix (HeLa-S3) 21328610
chr1 110496006 110496890 ZNF143 GTRD no Epithelial (MCF-7) 21328621
chr1 110496013 110496897 ZNF143 GTRD no Epithelial (MCF-7) 21328623
chr1 110496529 110496854 ZNF143 GTRD no Epithelial (MCF-7) 21328629
chr1 110496590 110496932 ZNF143 GTRD no Epithelial (MCF-7) 21328630
chr1 110496595 110496606 DMRT3 JASPAR yes 31455380
chr1 110496597 110496609 TEF JASPAR yes 31455381
Genes associated with rs577465936[chr1:110496597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More