EnhancerDB
  1. Home
  2. SNP
  3. rs5777275[chr1:116913400]
Enhancers that have rs5777275[chr1:116913400]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116912865 116924675 enh582
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs5777275[chr1:116913400]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116913397 116913412 FOXP1 JASPAR yes 31801256
chr1 116913398 116913413 FOXP1 JASPAR yes 31801257
chr1 116913399 116913405 TBP TRANSFAC yes 31801258
chr1 116913399 116913414 FOXP1 JASPAR yes 31801259
chr1 116913399 116913420 IRF1 JASPAR yes 31801260
chr1 116913400 116913415 FOXP1 JASPAR yes 31801261
chr1 116913400 116913421 IRF1 JASPAR yes 31801262
Genes associated with rs5777275[chr1:116913400], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More