EnhancerDB
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  3. rs5777987[chr1:156467893]
Enhancers that have rs5777987[chr1:156467893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156444279 156469175 enh658
Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs5777987[chr1:156467893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156467264 156468404 TCF7L2 GTRD no Colon (HCT116) 21342264
chr1 156467496 156468322 TCF7L2 GTRD no Colon (HCT116) 21342265
chr1 156467522 156468554 TCF7L2 GTRD no Colon (HCT116) 21342266
chr1 156467583 156468341 TCF7L2 GTRD no Colon (HCT116) 21342267
chr1 156467869 156468258 ZNF274 GTRD no Blood (GM12878) 21342268
chr1 156467886 156467901 LEF1 JASPAR yes 32392086
chr1 156467888 156467909 IRF1 JASPAR yes 32392087
chr1 156467890 156467905 FOXP1 JASPAR yes 32392088
chr1 156467891 156467906 FOXP1 JASPAR yes 32392089
chr1 156467892 156467898 TBP TRANSFAC yes 32392090
chr1 156467892 156467907 FOXP1 JASPAR yes 32392091
chr1 156467892 156467913 IRF1 JASPAR yes 32392092
chr1 156467893 156467908 FOXP1 JASPAR yes 32392093
chr1 156467893 156467914 IRF1 JASPAR yes 32392094
Genes associated with rs5777987[chr1:156467893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More