EnhancerDB
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  3. rs5780018[chr1:200277221]
Enhancers that have rs5780018[chr1:200277221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs5780018[chr1:200277221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200277213 200277225 E2F8 JASPAR yes 34432772
chr1 200277215 200277236 IRF1 JASPAR yes 34432773
chr1 200277219 200277233 STAT1 JASPAR yes 34432774
chr1 200277219 200277234 STAT2 JASPAR yes 34432775
chr1 200277219 200277237 IRF2 JASPAR yes 34432776
Genes associated with rs5780018[chr1:200277221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More