EnhancerDB
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  3. rs5780380[chr1:207419267]
Enhancers that have rs5780380[chr1:207419267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207411289 207420112 enh12601
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Lung (A549) Placenta Lung (PC-9) Breast Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs5780380[chr1:207419267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207419257 207419268 FOXH1 JASPAR yes 34850859
chr1 207419260 207419273 ZBTB18 JASPAR yes 34850860
chr1 207419261 207419271 MAX JASPAR yes 34850861
chr1 207419264 207419275 USF1 JASPAR yes 34850862
chr1 207419264 207419275 USF2 JASPAR yes 34850863
chr1 207419265 207419275 MAX JASPAR yes 34850864
chr1 207419266 207419279 NR2F1 JASPAR yes 34850865
Genes associated with rs5780380[chr1:207419267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More