EnhancerDB
  1. Home
  2. SNP
  3. rs578055175[chr1:25346081]
Enhancers that have rs578055175[chr1:25346081]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
chr1 25345809 25346202 vista813
VISTA
Transcript factors that have rs578055175[chr1:25346081]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25346068 25346083 SCRT1 JASPAR yes 27554248
chr1 25346068 25346083 ZIC4 JASPAR yes 27554249
chr1 25346068 25346083 SCRT1 JASPAR yes 118252484
chr1 25346068 25346083 ZIC4 JASPAR yes 118252485
chr1 25346070 25346083 SCRT2 JASPAR yes 27554254
chr1 25346070 25346083 SCRT2 JASPAR yes 118252490
chr1 25346076 25346086 SREBF1 JASPAR yes 27554256
chr1 25346076 25346086 SREBF2 JASPAR yes 27554257
chr1 25346076 25346086 SREBF1 JASPAR yes 118252492
chr1 25346076 25346086 SREBF2 JASPAR yes 118252493
Genes associated with rs578055175[chr1:25346081], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More