EnhancerDB
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  3. rs578104509[chr1:200314958]
Enhancers that have rs578104509[chr1:200314958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs578104509[chr1:200314958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200313703 200315096 ZNF274 GTRD no Liver (HepG2) 21363149
chr1 200313866 200315056 ZNF274 GTRD no Liver (HepG2) 21363150
chr1 200313906 200314989 ZNF274 GTRD no Liver (HepG2) 21363151
chr1 200313976 200314968 ZNF274 GTRD no Liver (HepG2) 21363153
chr1 200313979 200315408 ZNF274 GTRD no Liver (HepG2) 21363154
chr1 200314070 200315027 ZNF274 GTRD no Liver (HepG2) 21363161
chr1 200314162 200314983 ZNF274 GTRD no Liver (HepG2) 21363171
chr1 200314952 200314973 IRF1 JASPAR yes 34437716
chr1 200314954 200314975 IRF1 JASPAR yes 34437717
chr1 200314955 200314970 FOXP1 JASPAR yes 34437718
chr1 200314955 200314976 IRF1 JASPAR yes 34437719
chr1 200314956 200314977 IRF1 JASPAR yes 34437720
chr1 200314957 200314972 FOXP1 JASPAR yes 34437721
chr1 200314957 200314978 IRF1 JASPAR yes 34437722
chr1 200314958 200314973 FOXP1 JASPAR yes 34437723
chr1 200314958 200314979 IRF1 JASPAR yes 34437724
Genes associated with rs578104509[chr1:200314958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More