EnhancerDB
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  3. rs57853322[chr1:53128496]
Enhancers that have rs57853322[chr1:53128496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53122462 53131595 enh58092
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs57853322[chr1:53128496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53128308 53128718 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107803823
chr1 53128321 53128797 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803824
chr1 53128334 53128984 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803825
chr1 53128369 53128745 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803826
chr1 53128369 53128834 TCF7L2 GTRD no Colon (HCT116) 107803827
chr1 53128392 53128736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803828
chr1 53128420 53128824 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803829
chr1 53128421 53128736 NR3C1 UCSC Txn Factor no Conserved 107803830
chr1 53128444 53128828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803831
chr1 53128479 53128865 ZNF274 GTRD no Bone Marrow (K562) 107803832
chr1 53128485 53128500 TFAP2A JASPAR yes 28901382
chr1 53128485 53128500 TFAP2C JASPAR yes 28901383
chr1 53128487 53128499 TFAP2A JASPAR yes 28901385
chr1 53128487 53128499 TFAP2B JASPAR yes 28901386
chr1 53128487 53128499 TFAP2C JASPAR yes 28901387
chr1 53128487 53128502 TFAP2A JASPAR yes 28901388
chr1 53128487 53128502 TFAP2C JASPAR yes 28901389
chr1 53128495 53128505 NFKB1 JASPAR yes 28901390
chr1 53128495 53128506 NFKB1 JASPAR yes 28901391
Genes associated with rs57853322[chr1:53128496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More