EnhancerDB
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  3. rs578554[chr1:10741669]
Enhancers that have rs578554[chr1:10741669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10726105 10750095 enh11495
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Brain (SK-N-SH) Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs578554[chr1:10741669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10741659 10741669 ALX3 JASPAR yes 26734949
chr1 10741659 10741669 ESX1 JASPAR yes 26734950
chr1 10741659 10741669 GSX1 JASPAR yes 26734951
chr1 10741659 10741669 GSX2 JASPAR yes 26734952
chr1 10741659 10741669 HOXB2 JASPAR yes 26734953
chr1 10741659 10741669 HOXB3 JASPAR yes 26734954
chr1 10741659 10741669 LBX2 JASPAR yes 26734955
chr1 10741659 10741669 LHX2 JASPAR yes 26734956
chr1 10741659 10741669 MEOX1 JASPAR yes 26734957
chr1 10741659 10741669 MEOX2 JASPAR yes 26734958
chr1 10741659 10741669 MIXL1 JASPAR yes 26734959
chr1 10741659 10741669 MNX1 JASPAR yes 26734960
chr1 10741659 10741669 NOTO JASPAR yes 26734961
Genes associated with rs578554[chr1:10741669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More