EnhancerDB
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  3. rs57949662[chr17:61253822]
Enhancers that have rs57949662[chr17:61253822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 61246865 61258255 enh32268
Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Stomach Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs57949662[chr17:61253822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 61253818 61253829 PHOX2A JASPAR yes 55239248
chr17 61253819 61253823 YY1 TRANSFAC yes 55239249
chr17 61253820 61253831 HOXA10 JASPAR yes 55239250
chr17 61253821 61253831 EMX1 JASPAR yes 55239251
chr17 61253821 61253831 GBX2 JASPAR yes 55239252
chr17 61253821 61253831 GSX1 JASPAR yes 55239253
chr17 61253821 61253831 GSX2 JASPAR yes 55239254
chr17 61253821 61253831 HOXB2 JASPAR yes 55239255
chr17 61253821 61253831 HOXB3 JASPAR yes 55239256
chr17 61253821 61253831 MEOX1 JASPAR yes 55239257
chr17 61253821 61253831 MEOX2 JASPAR yes 55239258
chr17 61253821 61253831 MIXL1 JASPAR yes 55239259
chr17 61253821 61253831 MNX1 JASPAR yes 55239260
chr17 61253822 61253830 LMX1A JASPAR yes 55239261
chr17 61253822 61253830 LMX1B JASPAR yes 55239262
chr17 61253822 61253830 NKX6-1 JASPAR yes 55239263
chr17 61253822 61253830 NKX6-2 JASPAR yes 55239264
chr17 61253822 61253830 PDX1 JASPAR yes 55239265
chr17 61253822 61253830 VAX1 JASPAR yes 55239266
chr17 61253822 61253830 VAX2 JASPAR yes 55239267
chr17 61253822 61253830 VSX1 JASPAR yes 55239268
Genes associated with rs57949662[chr17:61253822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More