EnhancerDB
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  3. rs58246071[chr12:109012788]
Enhancers that have rs58246071[chr12:109012788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs58246071[chr12:109012788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109012601 109012959 TCF7L2 GTRD no Colon (HCT116) 21571065
chr12 109012771 109012792 IRF1 JASPAR yes 123607572
chr12 109012773 109012788 PRDM1 JASPAR yes 123607574
chr12 109012776 109012797 IRF1 JASPAR yes 123607575
chr12 109012777 109012792 FOXP1 JASPAR yes 123607576
chr12 109012777 109012798 IRF1 JASPAR yes 123607577
chr12 109012778 109012793 STAT2 JASPAR yes 123607578
chr12 109012781 109012802 IRF1 JASPAR yes 123607579
chr12 109012782 109012797 FOXP1 JASPAR yes 123607580
chr12 109012782 109012803 IRF1 JASPAR yes 123607581
chr12 109012786 109012807 IRF1 JASPAR yes 123607582
chr12 109012787 109012802 FOXP1 JASPAR yes 123607583
chr12 109012787 109012808 IRF1 JASPAR yes 123607584
chr12 109012788 109012809 IRF1 JASPAR yes 123607585
Genes associated with rs58246071[chr12:109012788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More