EnhancerDB
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Enhancers that have rs5827242[chr19:14670793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 14670632 14670897 vista28768
VISTA
Transcript factors that have rs5827242[chr19:14670793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14670325 14670882 ZNF274 GTRD no Liver (HepG2) 21853746
chr19 14670325 14670882 ZNF274 GTRD no Liver (HepG2) 108391987
chr19 14670356 14670859 ZNF274 GTRD no Bone Marrow (K562) 108391988
chr19 14670413 14670949 ZNF274 GTRD no Liver (HepG2) 21853747
chr19 14670413 14670949 ZNF274 GTRD no Liver (HepG2) 108391989
chr19 14670781 14670796 TFAP2C JASPAR yes 70813707
chr19 14670781 14670796 TFAP2C JASPAR yes 112579434
chr19 14670782 14670793 TFAP2A JASPAR yes 70813708
chr19 14670782 14670793 TFAP2B JASPAR yes 70813709
chr19 14670782 14670793 TFAP2C JASPAR yes 70813710
chr19 14670782 14670793 TFAP2A JASPAR yes 112579435
chr19 14670782 14670793 TFAP2B JASPAR yes 112579436
chr19 14670782 14670793 TFAP2C JASPAR yes 112579437
chr19 14670791 14670795 YY1 TRANSFAC yes 70813712
chr19 14670791 14670795 YY1 TRANSFAC yes 112579439
Genes associated with rs5827242[chr19:14670793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More