EnhancerDB
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  3. rs58312017[chr19:3460199]
Enhancers that have rs58312017[chr19:3460199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3455785 3462255 enh99535
Uterus
Transcript factors that have rs58312017[chr19:3460199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3455740 3460473 TCF7L2 GTRD no Colon (HCT116) 108367170
chr19 3455740 3460473 TCF7L2 GTRD no Colon (HCT116) 108367171
chr19 3456778 3460584 ZBTB33 GTRD no Lung (A549) 108367173
chr19 3456778 3460584 ZBTB33 GTRD no Lung (A549) 108367174
chr19 3457127 3460392 ZBTB33 GTRD no Lung (A549) 108367182
chr19 3457127 3460392 ZBTB33 GTRD no Lung (A549) 108367183
chr19 3457130 3460457 ZBTB33 GTRD no Lung (A549) 108367184
chr19 3457130 3460457 ZBTB33 GTRD no Lung (A549) 108367185
chr19 3457642 3460460 TCF7L2 GTRD no Colon (HCT116) 108367191
chr19 3457642 3460460 TCF7L2 GTRD no Colon (HCT116) 108367192
chr19 3458821 3460539 TCF7L2 GTRD no Colon (HCT116) 108367208
chr19 3458847 3460204 SOX2 GTRD no Neural Stem Cells (H9) 108367210
chr19 3458858 3460413 TCF7L2 GTRD no Colon (HCT116) 108367211
chr19 3458897 3460408 TCF7L2 GTRD no Colon (HCT116) 108367212
chr19 3458932 3460217 SOX2 GTRD no Neural Stem Cells (H9) 108367214
chr19 3460187 3460202 ZIC3 JASPAR yes 112133624
chr19 3460196 3460201 SP1 TRANSFAC yes 112133625
chr19 3460196 3460210 PLAG1 JASPAR yes 112133626
chr19 3460199 3460205 YY1 JASPAR yes 112133627
Genes associated with rs58312017[chr19:3460199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More