EnhancerDB
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  3. rs58330488[chr1:117015567]
Enhancers that have rs58330488[chr1:117015567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs58330488[chr1:117015567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117015421 117016377 ZNF143 GTRD no Epithelial (MCF-7) 21332809
chr1 117015437 117016480 ZNF143 GTRD no Epithelial (MCF-7) 21332810
chr1 117015531 117016164 ZNF143 GTRD no Epithelial (MCF-7) 21332811
chr1 117015537 117016205 ZNF143 GTRD no Epithelial (MCF-7) 21332812
chr1 117015558 117015571 NFKB1 JASPAR yes 31810494
chr1 117015558 117015571 NFKB2 JASPAR yes 31810495
chr1 117015559 117015570 NFKB1 JASPAR yes 31810496
chr1 117015560 117015571 NFKB1 JASPAR yes 31810497
chr1 117015562 117015576 PLAG1 JASPAR yes 31810498
chr1 117015563 117016215 ZNF143 GTRD no Epithelial (MCF-7) 21332813
chr1 117015564 117015576 TFAP2A JASPAR yes 31810499
chr1 117015564 117015578 EBF1 JASPAR yes 31810500
chr1 117015564 117015579 TFAP2A JASPAR yes 31810501
chr1 117015565 117015574 TFAP2A JASPAR yes 31810502
Genes associated with rs58330488[chr1:117015567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More