EnhancerDB
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  3. rs5838560[chr2:216844701]
Enhancers that have rs5838560[chr2:216844701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216842445 216850617 enh59020
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (GM12878) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs5838560[chr2:216844701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216844686 216844701 FOXP1 JASPAR yes 80827100
chr2 216844687 216844702 FOXA1 JASPAR yes 80827102
chr2 216844688 216844708 RREB1 JASPAR yes 80827104
chr2 216844689 216844701 FOXI1 JASPAR yes 80827105
chr2 216844689 216844709 RREB1 JASPAR yes 80827106
chr2 216844690 216844705 FOXP1 JASPAR yes 80827107
chr2 216844692 216844712 RREB1 JASPAR yes 80827108
chr2 216844693 216844705 FOXI1 JASPAR yes 80827109
chr2 216844693 216844713 RREB1 JASPAR yes 80827110
chr2 216844697 216844712 FOXP1 JASPAR yes 80827111
chr2 216844697 216844717 RREB1 JASPAR yes 80827112
chr2 216844697 216844718 IRF1 JASPAR yes 80827113
chr2 216844698 216844713 FOXP1 JASPAR yes 80827114
chr2 216844698 216844719 IRF1 JASPAR yes 80827115
chr2 216844699 216844714 FOXP1 JASPAR yes 80827116
chr2 216844701 216844716 FOXP1 JASPAR yes 80827117
Genes associated with rs5838560[chr2:216844701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More