EnhancerDB
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  3. rs5839398[chr2:232229508]
Enhancers that have rs5839398[chr2:232229508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232224984 232232485 enh19319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Astrocyte Muscle (A673) Placenta Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs5839398[chr2:232229508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232229503 232229518 MEF2C JASPAR yes 81714160
chr2 232229506 232229521 FOXP1 JASPAR yes 81714161
chr2 232229508 232229523 FOXP1 JASPAR yes 81714162
Genes associated with rs5839398[chr2:232229508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More