EnhancerDB
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  3. rs5839647[chr2:237685703]
Enhancers that have rs5839647[chr2:237685703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 237683044 237689195 enh34427
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Spleen Epithelial (MCF-7)
chr2 237685373 237686074 vista35342
VISTA
Transcript factors that have rs5839647[chr2:237685703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 237685426 237685775 STAT3 UCSC Txn Factor no Conserved 108435875
chr2 237685687 237685708 IRF1 JASPAR yes 22238244
chr2 237685687 237685708 IRF1 JASPAR yes 82053710
chr2 237685688 237685703 FOXP1 JASPAR yes 22238245
chr2 237685688 237685703 FOXP1 JASPAR yes 82053711
chr2 237685690 237685705 FOXP1 JASPAR yes 22238246
chr2 237685690 237685705 FOXP1 JASPAR yes 82053712
chr2 237685691 237685711 RREB1 JASPAR yes 22238247
chr2 237685691 237685711 RREB1 JASPAR yes 82053713
chr2 237685691 237685712 IRF1 JASPAR yes 22238248
chr2 237685691 237685712 IRF1 JASPAR yes 82053714
chr2 237685692 237685713 IRF1 JASPAR yes 22238249
chr2 237685692 237685713 IRF1 JASPAR yes 82053715
chr2 237685693 237685708 FOXP1 JASPAR yes 22238250
chr2 237685693 237685708 FOXP1 JASPAR yes 82053716
chr2 237685697 237685718 IRF1 JASPAR yes 22238251
chr2 237685697 237685718 IRF1 JASPAR yes 82053717
chr2 237685698 237685704 TCF4 TRANSFAC yes 22238252
chr2 237685698 237685704 TCF4 TRANSFAC yes 82053718
chr2 237685698 237685713 FOXP1 JASPAR yes 22238253
chr2 237685698 237685713 FOXP1 JASPAR yes 82053719
chr2 237685698 237685719 IRF1 JASPAR yes 22238254
chr2 237685698 237685719 IRF1 JASPAR yes 82053720
chr2 237685699 237685710 FOXP2 JASPAR yes 22238255
chr2 237685699 237685710 FOXP2 JASPAR yes 82053721
chr2 237685699 237685711 FOXC2 JASPAR yes 22238256
chr2 237685699 237685711 FOXC2 JASPAR yes 82053722
chr2 237685699 237685714 STAT2 JASPAR yes 22238257
chr2 237685699 237685714 STAT2 JASPAR yes 82053723
chr2 237685699 237685720 IRF1 JASPAR yes 22238258
chr2 237685699 237685720 IRF1 JASPAR yes 82053724
chr2 237685700 237685715 FOXP1 JASPAR yes 22238259
chr2 237685700 237685715 FOXP1 JASPAR yes 82053725
chr2 237685700 237685721 IRF1 JASPAR yes 22238260
chr2 237685700 237685721 IRF1 JASPAR yes 82053726
chr2 237685702 237685717 FOXP1 JASPAR yes 22238261
chr2 237685702 237685717 FOXP1 JASPAR yes 82053727
chr2 237685703 237685718 FOXP1 JASPAR yes 22238262
chr2 237685703 237685718 FOXP1 JASPAR yes 82053728
Genes associated with rs5839647[chr2:237685703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More