EnhancerDB
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  3. rs58407890[chr1:27378220]
Enhancers that have rs58407890[chr1:27378220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27368866 27378392 enh11659
Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Placenta Colon (HCT116) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs58407890[chr1:27378220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27378216 27378231 MEF2C JASPAR yes 27673490
chr1 27378217 27378222 GATA2 JASPAR yes 27673491
chr1 27378217 27378232 MEF2A JASPAR yes 27673492
chr1 27378218 27378230 MEF2A JASPAR yes 27673493
chr1 27378218 27378230 MEF2B JASPAR yes 27673494
chr1 27378218 27378230 MEF2D JASPAR yes 27673495
chr1 27378219 27378229 MEF2A JASPAR yes 27673496
chr1 27378219 27378231 FOXI1 JASPAR yes 27673497
chr1 27378220 27378224 TEAD2 TRANSFAC yes 27673498
chr1 27378220 27378225 TBP TRANSFAC yes 27673499
chr1 27378220 27378226 TMF TRANSFAC yes 27673500
Genes associated with rs58407890[chr1:27378220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More