EnhancerDB
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  3. rs58485219[chr1:171219970]
Enhancers that have rs58485219[chr1:171219970]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171218965 171226611 enh47254
Skin (Keratinocyte) Blood (OCI-LY7) Blood (GM12878) Thymus Epithelial (MCF-7)
Transcript factors that have rs58485219[chr1:171219970]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171219965 171219975 POU6F2 JASPAR yes 33069750
chr1 171219966 171219976 GSX1 JASPAR yes 33069751
chr1 171219966 171219976 GSX2 JASPAR yes 33069752
chr1 171219966 171219977 HOXC13 JASPAR yes 33069753
chr1 171219967 171219975 NKX6-1 JASPAR yes 33069754
chr1 171219967 171219975 NKX6-2 JASPAR yes 33069755
chr1 171219967 171219977 HOXC10 JASPAR yes 33069756
chr1 171219967 171219977 HOXD13 JASPAR yes 33069757
chr1 171219967 171219981 POU1F1 JASPAR yes 33069758
chr1 171219968 171219980 POU3F1 JASPAR yes 33069759
chr1 171219968 171219980 POU3F2 JASPAR yes 33069760
chr1 171219968 171219981 POU3F3 JASPAR yes 33069761
chr1 171219969 171219973 YY1 TRANSFAC yes 33069762
chr1 171219969 171219981 POU2F1 JASPAR yes 33069763
Genes associated with rs58485219[chr1:171219970], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More