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- rs58530056[chr16:3125628]
Enhancers that have rs58530056[chr16:3125628]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
3117605 |
3129375 |
enh47916 |
|
|
Transcript factors that have rs58530056[chr16:3125628]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
3122497
|
3125629
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108174268
|
|
|
chr16
|
3123467
|
3126752
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21685308
|
|
|
chr16
|
3123467
|
3126752
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108174278
|
|
|
chr16
|
3123479
|
3128054
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108174280
|
|
|
chr16
|
3123598
|
3125718
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108174294
|
|
|
chr16
|
3123637
|
3125791
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21685311
|
|
|
chr16
|
3123637
|
3125791
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108174300
|
|
|
chr16
|
3123673
|
3125705
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108174306
|
|
|
chr16
|
3123882
|
3125676
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21685322
|
|
|
chr16
|
3123882
|
3125676
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108174369
|
|
|
chr16
|
3125182
|
3125797
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108174490
|
|
|
chr16
|
3125244
|
3126615
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108174491
|
|
|
chr16
|
3125607
|
3125628
|
REST
|
JASPAR
|
yes
|
|
9202861
|
|
Genes associated with rs58530056[chr16:3125628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
3432085
|
3451065
|
-
|
ZSCAN32
|
ENSG00000140987.15
|
3451065
|
306457
|
Pancreas
|
0.274492
|
14481
|
|