EnhancerDB
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  3. rs58620855[chr1:235560269]
Enhancers that have rs58620855[chr1:235560269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235558909 235574575 enh12802
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs58620855[chr1:235560269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235560258 235560272 ONECUT2 JASPAR yes 36366161
chr1 235560260 235560271 FOXH1 JASPAR yes 36366162
chr1 235560261 235560273 PBX1 JASPAR yes 36366163
chr1 235560263 235560278 FOXA1 JASPAR yes 36366164
chr1 235560264 235560276 FOXI1 JASPAR yes 36366165
chr1 235560264 235560279 FOXP1 JASPAR yes 36366166
chr1 235560265 235560274 SRY JASPAR yes 36366167
chr1 235560265 235560276 FOXP2 JASPAR yes 36366168
chr1 235560265 235560277 FOXC2 JASPAR yes 36366169
chr1 235560265 235560279 FOXF2 JASPAR yes 36366170
chr1 235560266 235560274 FOXG1 JASPAR yes 36366171
chr1 235560266 235560274 FOXO3 JASPAR yes 36366172
chr1 235560266 235560277 FOXB1 JASPAR yes 36366173
chr1 235560266 235560277 FOXC1 JASPAR yes 36366174
chr1 235560266 235560282 POU4F3 JASPAR yes 36366175
chr1 235560267 235560278 FOXA1 JASPAR yes 36366176
chr1 235560267 235560282 FOXA1 JASPAR yes 36366177
chr1 235560268 235560280 FOXI1 JASPAR yes 36366178
chr1 235560268 235560282 POU4F1 JASPAR yes 36366179
chr1 235560268 235560283 FOXP1 JASPAR yes 36366180
chr1 235560268 235560283 HNF1A JASPAR yes 36366181
chr1 235560269 235560281 FOXC2 JASPAR yes 36366182
chr1 235560269 235560283 ONECUT2 JASPAR yes 36366183
chr1 235560269 235560283 ONECUT3 JASPAR yes 36366184
Genes associated with rs58620855[chr1:235560269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More