EnhancerDB
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  3. rs5875790[chr6:42080718]
Enhancers that have rs5875790[chr6:42080718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42078696 42093734 enh23246
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Thyroid Lung (PC-9) Pancreas Heart
Transcript factors that have rs5875790[chr6:42080718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42080712 42080733 IRF1 JASPAR yes 101692258
chr6 42080713 42080728 FOXP1 JASPAR yes 101692259
Genes associated with rs5875790[chr6:42080718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 43008515 43042837 + KLC4 ENSG00000137171.10 43008515 927797 Stomach 0.109417 6603