EnhancerDB
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  3. rs58830348[chr1:117031305]
Enhancers that have rs58830348[chr1:117031305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs58830348[chr1:117031305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117031294 117031313 RFX2 JASPAR yes 31812701
chr1 117031298 117031314 RFX2 JASPAR yes 31812702
chr1 117031298 117031314 RFX3 JASPAR yes 31812703
chr1 117031298 117031314 RFX4 JASPAR yes 31812704
chr1 117031298 117031314 RFX5 JASPAR yes 31812705
chr1 117031299 117031318 RFX2 JASPAR yes 31812706
chr1 117031300 117031311 CDX2 JASPAR yes 31812707
chr1 117031301 117031312 HOXA10 JASPAR yes 31812708
chr1 117031302 117031311 CDX1 JASPAR yes 31812709
chr1 117031302 117031312 HOXA13 JASPAR yes 31812710
chr1 117031302 117031312 HOXB13 JASPAR yes 31812711
chr1 117031302 117031312 HOXD13 JASPAR yes 31812712
chr1 117031302 117031317 MEF2C JASPAR yes 31812713
chr1 117031303 117031318 MEF2A JASPAR yes 31812714
chr1 117031304 117031316 MEF2A JASPAR yes 31812715
chr1 117031304 117031316 MEF2D JASPAR yes 31812716
chr1 117031305 117031315 MEF2A JASPAR yes 31812717
Genes associated with rs58830348[chr1:117031305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More