EnhancerDB
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  3. rs58943276[chr1:179124869]
Enhancers that have rs58943276[chr1:179124869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 179118385 179127395 enh773
Liver (HepG2) Large Intestine Esophagus Astrocyte Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs58943276[chr1:179124869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179124862 179124872 ALX3 JASPAR yes 33470639
chr1 179124862 179124872 GSX2 JASPAR yes 33470640
chr1 179124862 179124872 MIXL1 JASPAR yes 33470641
chr1 179124863 179124871 ISX JASPAR yes 33470642
chr1 179124863 179124871 LHX9 JASPAR yes 33470643
chr1 179124863 179124871 LMX1B JASPAR yes 33470644
chr1 179124863 179124871 PRRX1 JASPAR yes 33470645
chr1 179124863 179124871 RAX2 JASPAR yes 33470646
chr1 179124863 179124871 SHOX JASPAR yes 33470647
chr1 179124863 179124871 UNCX JASPAR yes 33470648
chr1 179124864 179124879 FOXP1 JASPAR yes 33470649
chr1 179124864 179124885 IRF1 JASPAR yes 33470650
chr1 179124865 179124886 IRF1 JASPAR yes 33470651
chr1 179124866 179124881 FOXP1 JASPAR yes 33470652
chr1 179124867 179124882 FOXP1 JASPAR yes 33470653
chr1 179124868 179124874 TBP TRANSFAC yes 33470654
chr1 179124868 179124883 FOXP1 JASPAR yes 33470655
chr1 179124869 179124884 FOXP1 JASPAR yes 33470656
chr1 179124869 179124890 IRF1 JASPAR yes 33470657
Genes associated with rs58943276[chr1:179124869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More