EnhancerDB
  1. Home
  2. SNP
  3. rs59104428[chr1:43427325]
Enhancers that have rs59104428[chr1:43427325]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs59104428[chr1:43427325]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43427121 43427524 TCF7L2 GTRD no Colon (HCT116) 107803008
chr1 43427316 43427328 TAL1 JASPAR yes 28470915
chr1 43427319 43427335 ZNF143 JASPAR yes 28470916
chr1 43427321 43427333 PBX1 JASPAR yes 28470917
Genes associated with rs59104428[chr1:43427325], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More