EnhancerDB
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  3. rs594488[chr1:183241262]
Enhancers that have rs594488[chr1:183241262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183231145 183244789 enh12448
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs594488[chr1:183241262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183240831 183245417 TEF1 GTRD no Bone (Osteoblast) 21358783
chr1 183240831 183245417 TEF1 GTRD no Bone (Osteoblast) 21358784
chr1 183240831 183245417 TEF1 GTRD no Bone (Osteoblast) 107850713
chr1 183241011 183241660 ZNF143 GTRD no Epithelial (MCF-7) 107850714
chr1 183241047 183241976 ZNF143 GTRD no Epithelial (MCF-7) 107850715
chr1 183241107 183241484 ZNF143 GTRD no Epithelial (MCF-7) 107850716
chr1 183241122 183241579 ZNF143 GTRD no Epithelial (MCF-7) 107850717
chr1 183241195 183241710 ZNF143 GTRD no Epithelial (MCF-7) 107850718
chr1 183241253 183241594 ZNF143 GTRD no Epithelial (MCF-7) 107850719
chr1 183241255 183241269 ZIC1 JASPAR yes 33667291
chr1 183241256 183241268 GRHL1 JASPAR yes 33667292
chr1 183241257 183241277 RREB1 JASPAR yes 33667293
chr1 183241262 183241274 IRF1 JASPAR yes 33667294
chr1 183241262 183241276 IRF7 JASPAR yes 33667295
Genes associated with rs594488[chr1:183241262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More