EnhancerDB
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  3. rs59540309[chr19:3521757]
Enhancers that have rs59540309[chr19:3521757]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3503817 3522715 enh4965
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs59540309[chr19:3521757]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3519844 3521765 ZNF274 GTRD no Bone Marrow (K562) 21839468
chr19 3519844 3521765 ZNF274 GTRD no Bone Marrow (K562) 108367429
chr19 3519844 3521765 ZNF274 GTRD no Bone Marrow (K562) 108367430
chr19 3519889 3521813 ZNF274 GTRD no Bone Marrow (K562) 21839470
chr19 3519889 3521813 ZNF274 GTRD no Bone Marrow (K562) 108367434
chr19 3519889 3521813 ZNF274 GTRD no Bone Marrow (K562) 108367435
chr19 3520095 3521822 ZNF274 GTRD no Bone Marrow (K562) 21839500
chr19 3520095 3521822 ZNF274 GTRD no Bone Marrow (K562) 108367489
chr19 3520095 3521822 ZNF274 GTRD no Bone Marrow (K562) 108367490
chr19 3520691 3521796 ZNF274 GTRD no Bone Marrow (K562) 21839606
chr19 3520691 3521796 ZNF274 GTRD no Bone Marrow (K562) 108367652
chr19 3520691 3521796 ZNF274 GTRD no Bone Marrow (K562) 108367653
chr19 3521356 3521864 TCF7L2 GTRD no Colon (HCT116) 21839628
chr19 3521356 3521864 TCF7L2 GTRD no Colon (HCT116) 108367683
Genes associated with rs59540309[chr19:3521757], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More