EnhancerDB
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  3. rs60001404[chr1:43478286]
Enhancers that have rs60001404[chr1:43478286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs60001404[chr1:43478286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43478283 43478298 FOXP1 JASPAR yes 28478098
chr1 43478284 43478299 FOXP1 JASPAR yes 28478099
chr1 43478285 43478300 FOXP1 JASPAR yes 28478100
chr1 43478285 43478306 IRF1 JASPAR yes 28478101
chr1 43478286 43478301 FOXP1 JASPAR yes 28478102
chr1 43478286 43478307 IRF1 JASPAR yes 28478103
Genes associated with rs60001404[chr1:43478286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More