EnhancerDB
  1. Home
  2. SNP
  3. rs60023956[chr1:43429754]
Enhancers that have rs60023956[chr1:43429754]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 43429290 43429917 vista1391
VISTA
Transcript factors that have rs60023956[chr1:43429754]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43428235 43430315 POLR2A UCSC Txn Factor no Conserved 107803010
chr1 43429747 43429757 SP1 JASPAR yes 28471257
chr1 43429747 43429757 SP1 JASPAR yes 118282193
chr1 43429749 43429754 SP1 TRANSFAC yes 28471258
chr1 43429749 43429754 SP1 TRANSFAC yes 118282194
chr1 43429749 43429755 SP1 TRANSFAC yes 28471259
chr1 43429749 43429755 SP1 TRANSFAC yes 118282195
chr1 43429749 43429756 SP1 TRANSFAC yes 28471260
chr1 43429749 43429756 SP1 TRANSFAC yes 118282196
chr1 43429750 43429771 ZNF263 JASPAR yes 28471261
chr1 43429750 43429771 ZNF263 JASPAR yes 118282197
chr1 43429752 43429772 RREB1 JASPAR yes 28471262
chr1 43429752 43429772 RREB1 JASPAR yes 118282198
chr1 43429753 43429767 PLAG1 JASPAR yes 28471263
chr1 43429753 43429767 PLAG1 JASPAR yes 118282199
chr1 43429753 43429768 NR2C2 JASPAR yes 28471264
chr1 43429753 43429768 NR2C2 JASPAR yes 118282200
chr1 43429753 43429774 ZNF263 JASPAR yes 28471265
chr1 43429753 43429774 ZNF263 JASPAR yes 118282201
chr1 43429754 43429768 PLAG1 JASPAR yes 28471266
chr1 43429754 43429768 PLAG1 JASPAR yes 118282202
Genes associated with rs60023956[chr1:43429754], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More