EnhancerDB
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  3. rs60171123[chr1:42230025]
Enhancers that have rs60171123[chr1:42230025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs60171123[chr1:42230025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42230005 42230026 ZNF263 JASPAR yes 28419336
chr1 42230018 42230039 ZNF263 JASPAR yes 28419342
chr1 42230023 42230035 PKNOX2 JASPAR yes 28419343
chr1 42230024 42230033 SNAI2 JASPAR yes 28419344
chr1 42230024 42230034 ID4 JASPAR yes 28419345
chr1 42230024 42230034 TCF3 JASPAR yes 28419346
chr1 42230024 42230034 TCF4 JASPAR yes 28419347
Genes associated with rs60171123[chr1:42230025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More