EnhancerDB
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  3. rs602988[chr1:182586203]
Enhancers that have rs602988[chr1:182586203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182579165 182589384 enh796
Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Uterus Thymus Heart
Transcript factors that have rs602988[chr1:182586203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182584446 182587153 ZNF274 GTRD no Bone Marrow (K562) 107850393
chr1 182585384 182587016 ZNF274 GTRD no Bone Marrow (K562) 107850471
chr1 182585528 182587109 ZNF274 GTRD no Bone Marrow (K562) 107850480
chr1 182585670 182586968 ZNF274 GTRD no Bone Marrow (K562) 107850482
Genes associated with rs602988[chr1:182586203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 182567758 182573543 - RGS16 ENSG00000143333.6 182573543 12660 Heart 0.127205 1632