EnhancerDB
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  3. rs60469538[chr4:6732228]
Enhancers that have rs60469538[chr4:6732228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 6719953 6738415 enh21338
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs60469538[chr4:6732228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 6732099 6732801 GATA1 UCSC Txn Factor no Conserved 108531943
chr4 6732116 6732998 POLR2A UCSC Txn Factor no Conserved 108531944
chr4 6732116 6732998 POLR2A UCSC Txn Factor no Conserved 108531945
chr4 6732223 6732238 MEF2C JASPAR yes 88053121
chr4 6732223 6732244 IRF1 JASPAR yes 88053122
chr4 6732225 6732240 FOXP1 JASPAR yes 88053123
chr4 6732226 6732241 FOXP1 JASPAR yes 88053124
chr4 6732227 6732233 TBP TRANSFAC yes 88053125
chr4 6732227 6732242 FOXP1 JASPAR yes 88053126
chr4 6732228 6732243 FOXP1 JASPAR yes 88053127
chr4 6732228 6732249 IRF1 JASPAR yes 88053128
Genes associated with rs60469538[chr4:6732228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More