-
Home
- SNP
- rs60478598[chr19:2952865]
Enhancers that have rs60478598[chr19:2952865]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
2951125 |
2958675 |
enh17856 |
|
|
Transcript factors that have rs60478598[chr19:2952865]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
2952707
|
2953884
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21838269
|
|
|
chr19
|
2952766
|
2953788
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21838270
|
|
|
chr19
|
2952856
|
2952868
|
HNF1B
|
JASPAR
|
yes
|
|
112102819
|
|
|
chr19
|
2952860
|
2952875
|
MEF2C
|
JASPAR
|
yes
|
|
112102820
|
|
|
chr19
|
2952862
|
2952877
|
FOXP1
|
JASPAR
|
yes
|
|
112102821
|
|
|
chr19
|
2952863
|
2953792
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21838271
|
|
|
chr19
|
2952864
|
2952870
|
TBP
|
TRANSFAC
|
yes
|
|
112102822
|
|
|
chr19
|
2952865
|
2953828
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21838272
|
|
Genes associated with rs60478598[chr19:2952865], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |