EnhancerDB
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  3. rs60505580[chr1:42082366]
Enhancers that have rs60505580[chr1:42082366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs60505580[chr1:42082366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42082363 42082374 E2F4 JASPAR yes 28401684
chr1 42082363 42082374 E2F6 JASPAR yes 28401685
chr1 42082364 42082375 E2F1 JASPAR yes 28401686
Genes associated with rs60505580[chr1:42082366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More