EnhancerDB
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  3. rs608580[chr1:42274777]
Enhancers that have rs608580[chr1:42274777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
Transcript factors that have rs608580[chr1:42274777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42274774 42274782 FOXC1 JASPAR yes 28425213
chr1 42274776 42274783 NKX3-1 JASPAR yes 28425214
Genes associated with rs608580[chr1:42274777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More