EnhancerDB
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  3. rs60978614[chr1:42236198]
Enhancers that have rs60978614[chr1:42236198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs60978614[chr1:42236198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42236187 42236201 POU1F1 JASPAR yes 28420253
chr1 42236188 42236200 POU3F1 JASPAR yes 28420254
chr1 42236188 42236200 POU3F2 JASPAR yes 28420255
chr1 42236188 42236201 POU3F3 JASPAR yes 28420256
chr1 42236189 42236201 POU2F1 JASPAR yes 28420257
chr1 42236190 42236199 POU3F4 JASPAR yes 28420258
chr1 42236190 42236199 POU5F1B JASPAR yes 28420259
chr1 42236196 42236206 POU6F2 JASPAR yes 28420261
Genes associated with rs60978614[chr1:42236198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More