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- rs61601220[chr1:116693030]
Enhancers that have rs61601220[chr1:116693030]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
116691805 |
116698555 |
enh575 |
|
|
Transcript factors that have rs61601220[chr1:116693030]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
116692914
|
116695956
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107823857
|
|
|
chr1
|
116692955
|
116694744
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107823858
|
|
|
chr1
|
116693026
|
116693032
|
MYC
|
TRANSFAC
|
yes
|
|
31776477
|
|
|
chr1
|
116693029
|
116693044
|
FOXP1
|
JASPAR
|
yes
|
|
31776478
|
|
|
chr1
|
116693029
|
116693050
|
IRF1
|
JASPAR
|
yes
|
|
31776479
|
|
Genes associated with rs61601220[chr1:116693030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
116242628
|
116311402
|
-
|
CASQ2
|
ENSG00000118729.10
|
116311402
|
381628
|
Ovary
|
0.346131
|
1055
|
|