EnhancerDB
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  3. rs617122[chr1:42276833]
Enhancers that have rs617122[chr1:42276833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
Transcript factors that have rs617122[chr1:42276833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42276817 42276837 PPARG JASPAR yes 28425550
chr1 42276823 42276833 HOXA13 JASPAR yes 28425554
chr1 42276823 42276833 HOXB13 JASPAR yes 28425555
chr1 42276823 42276833 HOXD13 JASPAR yes 28425556
chr1 42276823 42276834 FOXH1 JASPAR yes 28425557
chr1 42276823 42276834 HOXA10 JASPAR yes 28425558
chr1 42276824 42276833 CDX1 JASPAR yes 28425559
chr1 42276824 42276835 CDX2 JASPAR yes 28425560
chr1 42276830 42276843 TFAP2A JASPAR yes 28425561
chr1 42276830 42276843 TFAP2B JASPAR yes 28425562
chr1 42276830 42276843 TFAP2C JASPAR yes 28425563
Genes associated with rs617122[chr1:42276833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More