EnhancerDB
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  3. rs61799117[chr1:115976027]
Enhancers that have rs61799117[chr1:115976027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs61799117[chr1:115976027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115975325 115978487 ZNF274 GTRD no Cervix (HeLa-S3) 21331077
chr1 115975346 115977990 ZNF143 GTRD no Epithelial (MCF-7) 21331078
chr1 115975358 115978286 ZNF274 GTRD no Cervix (HeLa-S3) 21331079
chr1 115975367 115978667 ZNF143 GTRD no Epithelial (MCF-7) 21331080
chr1 115975374 115977658 ZNF143 GTRD no Epithelial (MCF-7) 21331081
chr1 115975445 115978027 ZNF143 GTRD no Epithelial (MCF-7) 21331082
chr1 115975459 115978113 ZNF274 GTRD no Cervix (HeLa-S3) 21331083
chr1 115975482 115976411 ZNF274 GTRD no Cervix (HeLa-S3) 21331084
chr1 115975491 115978055 ZNF143 GTRD no Epithelial (MCF-7) 21331085
chr1 115975494 115978099 ZNF274 GTRD no Cervix (HeLa-S3) 21331086
chr1 115975522 115978188 ZNF274 GTRD no Cervix (HeLa-S3) 21331087
chr1 115975548 115977225 ZNF143 GTRD no Epithelial (MCF-7) 21331088
chr1 115975553 115976472 ZNF143 GTRD no Epithelial (MCF-7) 21331089
chr1 115975553 115977928 ZNF143 GTRD no Epithelial (MCF-7) 21331090
chr1 115975578 115978094 ZNF274 GTRD no Cervix (HeLa-S3) 21331092
chr1 115975583 115976487 ZNF274 GTRD no Cervix (HeLa-S3) 21331093
chr1 115975618 115977283 ZNF143 GTRD no Epithelial (MCF-7) 21331094
chr1 115975645 115976454 ZBTB33 GTRD no Lung (A549) 21331095
chr1 115975659 115976449 ZNF274 GTRD no Cervix (HeLa-S3) 21331096
chr1 115975674 115977291 ZNF143 GTRD no Epithelial (MCF-7) 21331097
chr1 115975702 115977406 ZNF143 GTRD no Epithelial (MCF-7) 21331098
chr1 115975714 115977359 ZNF143 GTRD no Epithelial (MCF-7) 21331100
chr1 115975728 115977005 ZNF143 GTRD no Epithelial (MCF-7) 21331101
chr1 115975730 115977260 ZNF274 GTRD no Cervix (HeLa-S3) 21331102
chr1 115975731 115977003 ZNF274 GTRD no Cervix (HeLa-S3) 21331103
chr1 115975737 115976082 ZBTB33 GTRD no Lung (A549) 21331104
chr1 115975752 115977121 ZNF274 GTRD no Cervix (HeLa-S3) 21331105
chr1 115975763 115977339 ZNF143 GTRD no Epithelial (MCF-7) 21331106
chr1 115975765 115976342 ZNF143 GTRD no Epithelial (MCF-7) 21331107
chr1 115975766 115977268 TCF7L2 GTRD no Colon (HCT116) 21331108
chr1 115975777 115977375 TCF7L2 GTRD no Colon (HCT116) 21331109
chr1 115975784 115977949 ZNF143 GTRD no Epithelial (MCF-7) 21331110
chr1 115975867 115977195 ZNF274 GTRD no Cervix (HeLa-S3) 21331111
chr1 115975879 115976435 ZNF274 GTRD no Cervix (HeLa-S3) 21331112
chr1 115975880 115977365 ZNF143 GTRD no Epithelial (MCF-7) 21331113
chr1 115975891 115977361 ZNF143 GTRD no Epithelial (MCF-7) 21331114
chr1 115975900 115976743 TCF7L2 GTRD no Colon (HCT116) 21331115
chr1 115975914 115977160 TCF7L2 GTRD no Colon (HCT116) 21331116
chr1 115975950 115977341 TCF7L2 GTRD no Colon (HCT116) 21331117
chr1 115975952 115976385 ZBTB33 GTRD no Lung (A549) 21331118
chr1 115975965 115977435 ZNF143 GTRD no Epithelial (MCF-7) 21331119
chr1 115975968 115976521 ZNF143 GTRD no Epithelial (MCF-7) 21331120
chr1 115975987 115977104 TCF7L2 GTRD no Colon (HCT116) 21331121
chr1 115976004 115977356 TCF7L2 GTRD no Colon (HCT116) 21331122
chr1 115976013 115976931 ZBTB33 GTRD no Lung (A549) 21331123
chr1 115976020 115977236 TCF7L2 GTRD no Colon (HCT116) 21331124
chr1 115976020 115977500 ZNF143 GTRD no Epithelial (MCF-7) 21331125
chr1 115976021 115977489 ZNF143 GTRD no Epithelial (MCF-7) 21331126
Genes associated with rs61799117[chr1:115976027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 115828539 115880857 - NGF ENSG00000134259.3 115880857 95170 Liver 0.290576 1053