EnhancerDB
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  3. rs61824895[chr1:200264764]
Enhancers that have rs61824895[chr1:200264764]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs61824895[chr1:200264764]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200264473 200266432 ZNF143 GTRD no Epithelial (MCF-7) 21362880
chr1 200264573 200265550 ZNF143 GTRD no Epithelial (MCF-7) 21362881
chr1 200264573 200265734 ZNF143 GTRD no Epithelial (MCF-7) 21362882
chr1 200264614 200265612 ZNF143 GTRD no Epithelial (MCF-7) 21362883
chr1 200264616 200266014 ZNF143 GTRD no Epithelial (MCF-7) 21362884
chr1 200264625 200265421 ZNF143 GTRD no Epithelial (MCF-7) 21362885
chr1 200264739 200265685 ZNF143 GTRD no Epithelial (MCF-7) 21362886
chr1 200264750 200264769 PAX5 JASPAR yes 34430842
chr1 200264758 200265642 ZNF143 GTRD no Epithelial (MCF-7) 21362887
Genes associated with rs61824895[chr1:200264764], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201159953 201198080 + IGFN1 ENSG00000163395.12 201159953 895189 Thyroid 0.039495 1702