EnhancerDB
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  3. rs61824929[chr1:200412355]
Enhancers that have rs61824929[chr1:200412355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs61824929[chr1:200412355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200408739 200412574 ZNF143 GTRD no Epithelial (MCF-7) 21363494
chr1 200412093 200412549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363557
chr1 200412349 200412359 SP1 JASPAR yes 34448111
chr1 200412351 200412356 SP1 TRANSFAC yes 34448112
chr1 200412352 200412357 SP1 TRANSFAC yes 34448113
chr1 200412352 200412358 SP1 TRANSFAC yes 34448114
chr1 200412355 200412368 NFKB1 JASPAR yes 34448115
chr1 200412355 200412368 NFKB2 JASPAR yes 34448116
Genes associated with rs61824929[chr1:200412355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More