EnhancerDB
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  3. rs61826620[chr1:232731041]
Enhancers that have rs61826620[chr1:232731041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs61826620[chr1:232731041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232731031 232731046 TFAP2A JASPAR yes 36175255
chr1 232731031 232731046 TFAP2C JASPAR yes 36175256
chr1 232731034 232731046 TFAP2A JASPAR yes 36175257
chr1 232731034 232731046 TFAP2B JASPAR yes 36175258
chr1 232731034 232731046 TFAP2C JASPAR yes 36175259
chr1 232731034 232731049 TFAP2A JASPAR yes 36175260
chr1 232731035 232731044 TFAP2A JASPAR yes 36175261
chr1 232731041 232731045 LFA1 TRANSFAC yes 36175262
Genes associated with rs61826620[chr1:232731041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More