EnhancerDB
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  3. rs61956096[chr12:122950794]
Enhancers that have rs61956096[chr12:122950794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs61956096[chr12:122950794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122949230 122950869 TCF7L2 GTRD no Colon (HCT116) 21580062
chr12 122949283 122950953 AR GTRD no Prostate (PC-3) 21580063
chr12 122950091 122950945 ZNF143 GTRD no Epithelial (MCF-7) 21580066
chr12 122950201 122951150 TCF7L2 GTRD no Colon (HCT116) 21580067
chr12 122950204 122951004 TCF7L2 GTRD no Colon (HCT116) 21580068
chr12 122950244 122950897 TCF7L2 GTRD no Colon (HCT116) 21580070
chr12 122950356 122950899 TCF7L2 GTRD no Colon (HCT116) 21580071
chr12 122950737 122953032 ZBTB33 GTRD no Lung (A549) 108065921
chr12 122950792 122950797 SP1 TRANSFAC yes 124282996
Genes associated with rs61956096[chr12:122950794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 123011793 123110943 + KNTC1 ENSG00000184445.7 123011793 60999 Heart 0.0519491 12648