EnhancerDB
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Enhancers that have rs62048964[chr16:88537788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs62048964[chr16:88537788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88534755 88538907 ZNF274 GTRD no Liver (HepG2) 108222309
chr16 88534755 88538907 ZNF274 GTRD no Liver (HepG2) 108222310
chr16 88534755 88538907 ZNF274 GTRD no Liver (HepG2) 108222311
chr16 88536145 88537932 ZNF274 GTRD no Blood (GM12878) 108222368
chr16 88536145 88537932 ZNF274 GTRD no Blood (GM12878) 108222369
chr16 88536178 88538996 TCF7L2 GTRD no Colon (HCT116) 21736505
chr16 88536178 88538996 TCF7L2 GTRD no Colon (HCT116) 108222372
chr16 88536178 88538996 TCF7L2 GTRD no Colon (HCT116) 108222373
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 21736506
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222374
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222375
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222376
chr16 88536849 88537832 P63 GTRD no Skin (Keratinocyte) 108222385
chr16 88536987 88538920 TCF7L2 GTRD no Colon (HCT116) 21736510
chr16 88536987 88538920 TCF7L2 GTRD no Colon (HCT116) 108222390
chr16 88537001 88538029 ZNF274 GTRD no Liver (HepG2) 108222392
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 21736511
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 108222393
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 108222394
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 21736512
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 108222395
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 108222396
chr16 88537004 88539156 ZNF143 GTRD no Epithelial (MCF-7) 21736513
chr16 88537004 88539156 ZNF143 GTRD no Epithelial (MCF-7) 108222397
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 21736514
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 108222398
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 108222399
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 21736516
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 108222401
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 108222402
chr16 88537044 88537857 ZNF274 GTRD no Bone Marrow (K562) 21736517
chr16 88537044 88537857 ZNF274 GTRD no Bone Marrow (K562) 108222403
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 21736518
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 108222405
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 108222406
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 21736519
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 108222407
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 108222408
chr16 88537152 88537891 ZNF274 GTRD no Bone Marrow (K562) 21736521
chr16 88537152 88537891 ZNF274 GTRD no Bone Marrow (K562) 108222412
chr16 88537187 88537845 ZNF274 GTRD no Bone Marrow (K562) 21736523
chr16 88537187 88537845 ZNF274 GTRD no Bone Marrow (K562) 108222415
chr16 88537269 88539090 TCF7L2 GTRD no Colon (HCT116) 21736526
chr16 88537269 88539090 TCF7L2 GTRD no Colon (HCT116) 108222423
chr16 88537780 88537797 RARA JASPAR yes 12288145
chr16 88537786 88537804 ESR1 JASPAR yes 12288146
Genes associated with rs62048964[chr16:88537788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More