EnhancerDB
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Enhancers that have rs62048975[chr16:88560206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs62048975[chr16:88560206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88558694 88562778 ZNF274 GTRD no Bone Marrow (K562) 21736624
chr16 88558694 88562778 ZNF274 GTRD no Bone Marrow (K562) 108222539
chr16 88559578 88562000 ZNF274 GTRD no Liver (HepG2) 21736625
chr16 88559578 88562000 ZNF274 GTRD no Liver (HepG2) 108222540
chr16 88559635 88562500 ZNF274 GTRD no Bone Marrow (K562) 21736626
chr16 88559635 88562500 ZNF274 GTRD no Bone Marrow (K562) 108222541
chr16 88559752 88562799 ZNF143 GTRD no Epithelial (MCF-7) 21736627
chr16 88559752 88562799 ZNF143 GTRD no Epithelial (MCF-7) 108222542
chr16 88559771 88561439 ZNF143 GTRD no Epithelial (MCF-7) 21736628
chr16 88559771 88561439 ZNF143 GTRD no Epithelial (MCF-7) 108222543
chr16 88559775 88562609 ZNF143 GTRD no Epithelial (MCF-7) 21736629
chr16 88559775 88562609 ZNF143 GTRD no Epithelial (MCF-7) 108222544
chr16 88559781 88561476 ZNF143 GTRD no Epithelial (MCF-7) 21736630
chr16 88559781 88561476 ZNF143 GTRD no Epithelial (MCF-7) 108222545
chr16 88559979 88562544 ZBTB33 GTRD no Lung (A549) 108222546
chr16 88559993 88561503 ZNF143 GTRD no Epithelial (MCF-7) 21736631
chr16 88559993 88561503 ZNF143 GTRD no Epithelial (MCF-7) 108222547
chr16 88560022 88562827 TCF7L2 GTRD no Colon (HCT116) 21736632
chr16 88560022 88562827 TCF7L2 GTRD no Colon (HCT116) 108222548
chr16 88560055 88561158 ZNF274 GTRD no Bone Marrow (K562) 21736633
chr16 88560055 88561158 ZNF274 GTRD no Bone Marrow (K562) 108222549
chr16 88560056 88561452 ZNF143 GTRD no Epithelial (MCF-7) 21736634
chr16 88560056 88561452 ZNF143 GTRD no Epithelial (MCF-7) 108222550
chr16 88560065 88562507 ZNF143 GTRD no Epithelial (MCF-7) 21736635
chr16 88560065 88562507 ZNF143 GTRD no Epithelial (MCF-7) 108222551
chr16 88560105 88561883 ZNF274 GTRD no Cervix (HeLa-S3) 108222552
chr16 88560109 88561413 TCF7L2 GTRD no Colon (HCT116) 21736636
chr16 88560109 88561413 TCF7L2 GTRD no Colon (HCT116) 108222553
chr16 88560140 88562364 ZNF274 GTRD no Liver (HepG2) 21736637
chr16 88560140 88562364 ZNF274 GTRD no Liver (HepG2) 108222554
chr16 88560156 88562789 ZNF274 GTRD no Bone Marrow (K562) 21736638
chr16 88560156 88562789 ZNF274 GTRD no Bone Marrow (K562) 108222555
chr16 88560178 88562983 ZNF274 GTRD no Bone Marrow (K562) 21736639
chr16 88560178 88562983 ZNF274 GTRD no Bone Marrow (K562) 108222556
chr16 88560192 88560212 PPARG JASPAR yes 12290634
chr16 88560202 88560220 SRF JASPAR yes 12290636
chr16 88560205 88560217 SRF JASPAR yes 12290637
Genes associated with rs62048975[chr16:88560206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More